| MirGeneDB ID | Ovu-Novel-81-v2 |
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| Family name |
OCT-NOVEL-81 (all species) |
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| Seed |
GGAGCUG |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
Ovu-Novel-81-v1
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| Orthologues |
Obi-Novel-81-v2
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| Node of Origin (locus) |
Octopus
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| Node of Origin (family) |
Octopus
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01012977.1: 2440-2499 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUGUUUAUUAGAUGAACAUCUUGGGAAACCACUUUAAUAUGCAGUCUCCUUUAGUCUGUCUAAUUAAAAGGAGCUGUGUAUUAGAAGAGAUUUGCCAAGAAAUCAGGCACCAAAAUUCUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GUGUUUAUUAGAUGAACA-- G CCAC-| U AGUCUG
UCUUGG AAA UUUAAUAUGCAG CUCCUUU U
AGAACC UUU AGAUUAUGUGUC GAGGAAA C
AUCUUAAAACCACGGACUAA G AGAGA^ - AUUAAU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Star sequence |
Ovu-Novel-81-v2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- ACUUUAAUAUGCAGUCUCCUUU -22
Get sequence
|
|---|
| Mature sequence |
Ovu-Novel-81-v2_3p |
| mirBase accession | None |
|---|
| Sequence |
38- AGGAGCUGUGUAUUAGAAGAGA -60
Get sequence
|
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