| MirGeneDB ID | Ovu-Novel-80 |
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| Family name |
OCT-NOVEL-80 (all species) |
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| Seed |
GUGUCCC |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Obi-Novel-80
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| Node of Origin (locus) |
Octopus
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| Node of Origin (family) |
Octopus
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01042289.1: 1235037-1235105 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUCUACAGCCGUUACCGAAUCGCAGAGGAAAGUUGGAUUUGUGGAGGCACAUUUUCAGUCUCACCAAACAACAGUUAUGUGUCCCACAGUUCCAACUCUCAGUUGUCGAUAUUAACUUAAAGCAUCAGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AUCUACAGCCGUUACCGA- -| AG A U A UUUCAGUCUCA
AUCG CAG GA AGUUGGA UUGUGG GGCACAU C
UAGC GUU CU UCAACCU GACACC CUGUGUA C
UGACUACGAAAUUCAAUUA U^ GA C U - UUGACAACAAA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Star sequence |
Ovu-Novel-80_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGUUGGAUUUGUGGAGGCACAUU -23
Get sequence
|
|---|
| Mature sequence |
Ovu-Novel-80_3p |
| mirBase accession | None |
|---|
| Sequence |
47- UGUGUCCCACAGUUCCAACUCU -69
Get sequence
|
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