| MirGeneDB ID | Ovu-Novel-71-v1 |
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| Family name |
OCT-NOVEL-71 (all species) |
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| Seed |
CUGAGUU |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
Ovu-Novel-71-v2
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| Orthologues |
Obi-Novel-71-v1
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| Node of Origin (locus) |
Octopus
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| Node of Origin (family) |
Octopus
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01063117.1: 62344-62399 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUCCAAGGAAUAGUUUACCGUAAAAAUGUUUCUGAGUUCCUCAGUCAGUGAAAUAUGCCAAUGCACUGAUUGGAGAAGGCAGAAAACAUUAUUAUGGAAUUUUGACGUAAACCAAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUCCAAGGAAUAGUUUA-- A -| AG CU AAAUAU
CCGUAA AAUG UUUCUG UUC CAGUCAGUG \
GGUAUU UUAC AAAGAC AAG GUUAGUCAC G
CAACCAAAUGCAGUUUUAA A A^ GG AG GUAACC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Mature sequence |
Ovu-Novel-71-v1_5p |
| mirBase accession | None |
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| Sequence |
0- UCUGAGUUCCUCAGUCAGUGA -21
Get sequence
|
|---|
| Star sequence |
Ovu-Novel-71-v1_3p* |
| mirBase accession | None |
|---|
| Sequence |
33- CACUGAUUGGAGAAGGCAGAAAA -56
Get sequence
|
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