| MirGeneDB ID | Ovu-Novel-5 |
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| Family name |
CEP-NOVEL-5 (all species) |
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| Seed |
GUUCCUA |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Esc-Novel-5
Npo-Novel-5
Obi-Novel-5
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| Node of Origin (locus) |
Cephalopoda
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| Node of Origin (family) |
Cephalopoda
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01019738.1: 354-413 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAAUAUUCUGUUACCAAACUUUUCUAUCAUAUUCGGUCCUUUUUGGGACCUCGUUUCAAUCUAACGGAAGUUCCUAGAUGGACUGAGAAUGGUAGGUAAGUUCGACCACCAUAGCACCCU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AAAUAUUCUGUUACCAA--| U A U U C GUUUCA
ACUU UCUAUCAU UUCGGUCC UUU GGGAC UC A
UGAA GGAUGGUA GAGUCAGG AGA CCUUG AG U
UCCCACGAUACCACCAGCU^ U A U U A GCAAUC
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Star sequence |
Ovu-Novel-5_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AUUCGGUCCUUUUUGGGACCUC -22
Get sequence
|
|---|
| Mature sequence |
Ovu-Novel-5_3p |
| mirBase accession | None |
|---|
| Sequence |
38- AGUUCCUAGAUGGACUGAGAAU -60
Get sequence
|
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