| MirGeneDB ID | Ovu-Novel-37 |
|---|
| Family name |
COL-NOVEL-37 (all species) |
|---|
| Seed |
CCGCGAU |
|---|
| Species |
Common octopus (Octopus vulgaris) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Obi-Novel-37
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
|---|
Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01072831.1: 112164-112220 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CCAUCGACACGACGUUAGCGGAGGCUGGUUGCCGAAAACAUUUUGCGCUCUGAUGAUUUUGCCAAGACCGCGAUCUGCUUUCGGUGACUGGUCAUCUGCAACGCAACAAACCGGGCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCAUCGACACGACGUUA- -| UG UG A UU C GAUGAU
GCGGA GGC GU CCGAAA CA UUGCG UCU \
CGUCU CUG CA GGCUUU GU AGCGC AGA U
CCGGGCCAAACAACGCAA A^ GU GU C CU C ACCGUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Ovu-Novel-37_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GCCGAAAACAUUUUGCGCUCU -21
Get sequence
|
|---|
| Mature sequence |
Ovu-Novel-37_3p |
| mirBase accession | None |
|---|
| Sequence |
36- ACCGCGAUCUGCUUUCGGUGA -57
Get sequence
|
|---|
