| MirGeneDB ID | Ovu-Novel-30 |
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| Family name |
COL-NOVEL-30 (all species) |
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| Seed |
GGAACCA |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Esc-Novel-30
Obi-Novel-30
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01060892.1: 639952-640011 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UACAAAAUGAGAUGUGUUGCGACAGGGGCACGGAACCAACGCUGACUUACCUGGAGAUUUCUGAGAGGGUAAGUCAAUGCUGGCUUCGCGCCCAUGGAGCCAUAACCUUCAUUGGAAAAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UACAAAAUGAGAUGUGUU--| GA G A A A C GGAGAU
GC CA GGGC CGGA CCA CG UGACUUACCU U
CG GU CCCG GCUU GGU GU ACUGAAUGGG U
UAAAAGGUUACUUCCAAUAC^ AG A C C C A AGAGUC
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Mature sequence |
Ovu-Novel-30_5p |
| mirBase accession | None |
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| Sequence |
0- CGGAACCAACGCUGACUUACCU -22
Get sequence
|
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| Star sequence |
Ovu-Novel-30_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- GUAAGUCAAUGCUGGCUUCGCG -60
Get sequence
|
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