| MirGeneDB ID | Ovu-Novel-15 |
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| Family name |
COL-NOVEL-15 (all species) |
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| Seed |
CCGCUGU |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Esc-Novel-15
Obi-Novel-15
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01006525.1: 1339-1397 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUGGGUUGAUUUUGAUAAUGUCAAGAGCGCAGGUUAACCGGAUUAGCGUUCUGUCCGGUUCAAAAAGACCGCUGUUCCAGUUCAUCUGCGCCCGGACUCAGUUGUCUUCCACCAGAAUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUGGGUUGAUUUUGAUAAU---| AAGA U C U U GUCCGG
GUC GCGCAGGU AAC GGA UAGCG UCU \
CAG CGCGUCUA UUG CCU GUCGC AGA U
GUAAGACCACCUUCUGUUGACU^ GCC- C A U C AAAACU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Star sequence |
Ovu-Novel-15_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGGUUAACCGGAUUAGCGUUCU -22
Get sequence
|
|---|
| Mature sequence |
Ovu-Novel-15_3p |
| mirBase accession | None |
|---|
| Sequence |
37- ACCGCUGUUCCAGUUCAUCUGC -59
Get sequence
|
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