| MirGeneDB ID | Ovu-Mir-1986 |
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| Family name |
MIR-1986 (all species) |
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| Seed |
GGAUUUC |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Cgi-Mir-1986
Cte-Mir-1986
Efe-Mir-1986
Lan-Mir-1986
Lgi-Mir-1986
Npo-Mir-1986
Obi-Mir-1986
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| Node of Origin (locus) |
Lophotrochozoa
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| Node of Origin (family) |
Lophotrochozoa
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01020130.1: 87663-87721 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CCAACGUUGGAGCCUAACGCUGAUUGCAAUCAUGGCUCAUGGGAAGAUCACACGUCACGUUAACUCGUGGAUUUCCCAAGAUCCGUGAUUACAAUCUGACUUCAUUCAACCAAUUGUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCAACGUUGGAGCCUAACGCU--| C C A A A UCACG
GAUUG AAUCAUGG UC UGGGA GAUC CACG \
CUAAC UUAGUGCC AG ACCCU UUAG GUGC U
AGUGUUAACCAACUUACUUCAGU^ A U A - - UCAAU
110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Star sequence |
Ovu-Mir-1986_5p* |
| mirBase accession | None |
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| Sequence |
0- CAUGGCUCAUGGGAAGAUCACACG -24
Get sequence
|
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| Mature sequence |
Ovu-Mir-1986_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UGGAUUUCCCAAGAUCCGUGAU -59
Get sequence
|
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