| MirGeneDB ID | Obi-Novel-29-v1 |
|---|
| Family name |
COL-NOVEL-29 (all species) |
|---|
| Seed |
UUCCCGC |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
|---|
| Paralogues |
Obi-Novel-29-v2
|
|---|
| Orthologues |
Esc-Novel-29-v1
Ovu-Novel-29-v1
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ419643: 483041-483101 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AGGUACUGAUGACAAUGAUGGCUUGGCAGACAGACCUUUUCAGAAGGGGAAAAAUUAGGUUUCUCCAUUUUUCCCGCUGAAAAAGCCUUCCUGCCAAGACUCCUACCCAGGUUGUCAACGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AGGUACUGAUGACAAUGAU- -| AC ACC AA AUUAGG
GG CUUGGCAG AG UUUUCAG GGGGAAAA U
UC GAACCGUC UC AAAAGUC CCCUUUUU U
AGCAACUGUUGGACCCAUCC A^ CU CGA G- ACCUCU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Star sequence |
Obi-Novel-29-v1_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- CAGACCUUUUCAGAAGGGGAAAA -23
Get sequence
|
|---|
| Mature sequence |
Obi-Novel-29-v1_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UUUCCCGCUGAAAAAGCCUUCC -61
Get sequence
|
|---|
