| MirGeneDB ID | Obi-Novel-14 |
|---|
| Family name |
COL-NOVEL-14 (all species) |
|---|
| Seed |
CCACGGU |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Esc-Novel-14
Ovu-Novel-14
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
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Genome context
(PRJNA270931_OBI) |
KQ419141: 202251-202313 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UGAAAAUUGAGAAGAAACAGGCAAUUAGUAACUGGGUUUUCACUGAUGUCACGAACUAUUUCAAAUAUAUGACCACGGUGUAUAAUUCAGUAACUAGUAGCUUGUCUUACGACACUAAUAUUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UGAAAAUUGAGAAGAAA-- A A UU-| AU CGAACUAU
CAGGC AUUAGU ACUGGGUU CACUG GUCA U
GUUCG UGAUCA UGACUUAA GUGGC CAGU U
AUUAUAAUCACAGCAUUCU A A UAU^ AC AUAUAAAC
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Obi-Novel-14_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- ACUGGGUUUUCACUGAUGUCA -21
Get sequence
|
|---|
| Mature sequence |
Obi-Novel-14_3p |
| mirBase accession | None |
|---|
| Sequence |
41- ACCACGGUGUAUAAUUCAGUAA -63
Get sequence
|
|---|
