| MirGeneDB ID | Obi-Novel-12 |
|---|
| Family name |
CEP-NOVEL-12 (all species) |
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| Seed |
UUGGCAU |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Esc-Novel-12
Npo-Novel-12
Ovu-Novel-12
|
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| Node of Origin (locus) |
Cephalopoda
|
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| Node of Origin (family) |
Cephalopoda
|
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Genome context
(PRJNA270931_OBI) |
KQ416270: 137472-137529 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GUGGUUAUUGACAAACAGCUUGCGUGUAUGUUUGGCAUGGCAACCGCUUUGUGUAUAAGGCAUCACUAGUCGUUGACAUGCGCAAUACGUACGCGUAGACAUCGUACAGCCGAGCAAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUGGUUAUUGACAAACAGC- - -| G C UU GUAUA
UUGCGUGUAUGU UUG GCAUG CAAC GCU GU A
GAUGCGCAUGCA AAC CGUAC GUUG UGA CA G
UAACGAGCCGACAUGCUACA U G^ A C U- CUACG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
|---|
| Mature sequence |
Obi-Novel-12_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUUGGCAUGGCAACCGCUUUGU -22
Get sequence
|
|---|
| Star sequence |
Obi-Novel-12_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- CUAGUCGUUGACAUGCGCAAUAC -58
Get sequence
|
|---|
