MirGeneDB 2.1
MirGeneDB ID

Npo-Mir-252-P1

Family name MIR-252 (all species)
Seed UAAGUAG
Species Chambered Nautilus (Nautilus pompilius)
MiRBase ID
Paralogues Npo-Mir-252-P2 
Orthologues Asu-Mir-252-P1  Bfl-Mir-252-P1-v1  Bfl-Mir-252-P1-v2  Bge-Mir-252-P1  Bla-Mir-252-P1-v1  Bla-Mir-252-P1-v2  Cbr-Mir-252-P1  Cel-Mir-252-P1  Cgi-Mir-252-P1  Csc-Mir-252-P1  Cte-Mir-252-P1  Dan-Mir-252-P1a  Dan-Mir-252-P1b  Dma-Mir-252-P1-v1  Dma-Mir-252-P1-v2  Dme-Mir-252-P1a  Dme-Mir-252-P1b  Dmo-Mir-252-P1a  Dmo-Mir-252-P1b  Dpu-Mir-252-P1  Dsi-Mir-252-P1a  Dsi-Mir-252-P1b  Dya-Mir-252-P1a  Dya-Mir-252-P1b  Esc-Mir-252-P1  Hme-Mir-252-P1  Isc-Mir-252-P1  Lan-Mir-252-P1  Lgi-Mir-252-P1  Lpo-Mir-252-P1c  Lpo-Mir-252-P1e  Lpo-Mir-252-P1f  Obi-Mir-252-P1  Ovu-Mir-252-P1  Pfl-Mir-252-P1  Pmi-Mir-252-P1  Sko-Mir-252-P1  Spu-Mir-252-P1  Tca-Mir-252-P1  Xbo-Mir-252-P1g  Xbo-Mir-252-P1h  Xbo-Mir-252-P1i 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_018389105_NPO)		 JACATO010000601.1: 25040-25096 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CCAAUUAUUACAUCUGCUGUUUUUUCUGUGCUAAGUAGUGGCGCUGCAGGUAGUGCAGUUUCAGUACCUGCGUACUGCUACUUACAGCGGAGAAAACCAUCCACAAGCAUGGACUAG
Get precursor sequence
Structure
        10          20        30        40        50        
CCAAUUAUUACAUCUGCU--|          GC       UG CG U       GUGCA 
                    GUUUUUUCUGU  UAAGUAG  G  C GCAGGUA     G
                    CAAAAGAGGCG  AUUCAUC  C  G CGUCCAU     U
GAUCAGGUACGAACACCUAC^          AC       GU AU -       GACUU 
     110       100        90        80         70        60
Deep sequencing
3' NTU Unknown
MotifsUGUG in loop
Mature sequence

Npo-Mir-252-P1_5p (predicted)
mirBase accessionNone
Sequence 
0- CUAAGUAGUGGCGCUGCAGGUA -22
Get sequence
Star sequence

Npo-Mir-252-P1_3p* (predicted)
mirBase accessionNone
Sequence 
36- CCUGCGUACUGCUACUUACAG -57
Get sequence