| MirGeneDB ID | Npo-Mir-216-P2j |
|---|---|
| Family name | MIR-216 (all species) |
| Seed | AAUCUCA |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | Npo-Mir-216-P2k |
| Orthologues | Aae-Mir-216-P2 Asu-Mir-216-P2 Bfl-Mir-216-P2 Bge-Mir-216-P2 Bla-Mir-216-P2 Bpl-Mir-216-P2 Cbr-Mir-216-P2 Cel-Mir-216-P2 Cgi-Mir-216-P2 Dan-Mir-216-P2 Dma-Mir-216-P2 Dme-Mir-216-P2 Dmo-Mir-216-P2 Dpu-Mir-216-P2 Dsi-Mir-216-P2 Dya-Mir-216-P2 Efe-Mir-216-P2 Hme-Mir-216-P2 Isc-Mir-216-P2 Lgi-Mir-216-P2 Obi-Mir-216-P2j Ovu-Mir-216-P2j Tca-Mir-216-P2 |
| Node of Origin (locus) | Cephalopoda |
| Node of Origin (family) | Bilateria |
| Genome context (GCA_018389105_NPO) |
JACATO010001670.1: 36790-36848 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | GCUUGGAACCCGAGACCAGAGCUGAUUGUCUAAUCUCAGCUGGUAAAUCUGAGUGGUGCCUGCUCUCAACCUUACCAGCAGAGGUUUGACAAACACUCCUACUGACCACUCAACAGUCUGet precursor sequence |
| Structure | 10 20 30 40 50 GCUUGGAACCCGAGACCA---| C A U A AUC GUGGUG GAG UG UUGUC AAUCUC GCUGGUAA UGA \ CUC AC AACAG UUGGAG CGACCAUU ACU C UCUGACAACUCACCAGUCAUC^ - A U A CCA CUCGUC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17), UGUG in loop |
| Mature sequence | Npo-Mir-216-P2j_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UAAUCUCAGCUGGUAAAUCUGA -22
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|
| Star sequence | Npo-Mir-216-P2j_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- AACCUUACCAGCAGAGGUUUGA -59
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|
