| MirGeneDB ID | Mun-Mir-599 |
| Family name |
MIR-599 (all species) |
| Seed |
UUGAUAA |
| Species |
Microcaecilia (Microcaecilia unicolor) |
| MiRBase ID |
|
| Paralogues |
|
| Orthologues |
Ami-Mir-599
Bta-Mir-599
Cfa-Mir-599
Cli-Mir-599
Cpi-Mir-599
Ete-Mir-599
Hsa-Mir-599
Lch-Mir-599
Mdo-Mir-599
Mml-Mir-599
Mmu-Mir-599
Oan-Mir-599
Ocu-Mir-599
Pbv-Mir-599
Sha-Mir-599
Spt-Mir-599
Tgu-Mir-599
|
| Node of Origin (locus) |
Sarcopterygii
|
| Node of Origin (family) |
Sarcopterygii
|
Genome context (Mun_miRNA_loci) |
599_LR594632.1:549018497-549018639: 43-101 [-]
|
Precursor (pre-Mir +30nt flank) |
CAACAGGCAAUAUGCUCUGUUCACAGUGUGUUUGAUAAGCUGACAUGGGACAGGAGUAUCUUUUCACUGUUGUGUCAGUUUAUCAAACUCAUACUUGGACAUCACUCAGCUCCCUUUCA
Get precursor sequence
|
| Structure | 10 20 30 40 50
CAACAGGCAAUAUGCUC- C --| GG GAGUAU
UGUUCA AGUGU GUUUGAUAAGCUGACAU GACAG \
ACAGGU UCAUA CAAACUAUUUGACUGUG UUGUC C
ACUUUCCCUCGACUCACU - CU^ -- ACUUUU
110 100 90 80 70 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
Unknown
|
| Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
| Mature sequence |
Mun-Mir-599_5p |
| mirBase accession | None |
| Sequence |
0- UUUGAUAAGCUGACAUGGGACAG -23
Get sequence
|
| Star sequence |
Mun-Mir-599_3p* |
| mirBase accession | None |
| Sequence |
38- GUUGUGUCAGUUUAUCAAACU -59
Get sequence
|