MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-5626

Family name MIR-5626 (all species)
Seed AGCAGUU
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-5626
Paralogues
Orthologues
Node of Origin (locus) M. musculus
Node of Origin (family) M. musculus
Genome context
(mm10)		 chr9: 70405694-70405753 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCCCAGGUGGCUGAGAGCAUGGCUUGGGAGCCCCAUCGAUUAACUGCUUCCUGUUCUCAUGACCCGGCAGCAGUUGAGUGAUGUGACACCUAAGAUGCUCCCCUGAUGACUCCGGGGAC
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Structure
        10            20        30        40        50         
ACCCCAGGUGGCUGAGA----|   GG      AGCCC     A         U  UGUUCU 
                     GCAU  CUUGGG     CAUCG UUAACUGCU CC      C
                     CGUA  GAAUCC     GUAGU AGUUGACGA GG      A
CAGGGGCCUCAGUAGUCCCCU^   --      ACAGU     G         C  CCCAGU 
.       110       100          90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Star sequence

Mmu-Mir-5626_5p*
mirBase accessionMIMAT0022381
Sequence 
0- GCCCCAUCGAUUAACUGCUUCC -22
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Proposed targets TargetScanVert: mmu-miR-5626-5p
miRDB: MIMAT0022381
Mature sequence

Mmu-Mir-5626_3p
mirBase accessionMIMAT0022382
Sequence 
38- CAGCAGUUGAGUGAUGUGACAC -60
Get sequence
Proposed targets TargetScanVert: mmu-miR-5626-3p
miRDB: MIMAT0022382