MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-1948

Family name MIR-1948 (all species)
Seed UUAGGCA
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-1948
Paralogues
Orthologues
Node of Origin (locus) M. musculus
Node of Origin (family) M. musculus
Genome context
(mm10)		 chr18: 12714825-12714883 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACACAUUUAGGCAGAAUUCUCACCUUACUAUAUGAGUAUUCUGCCUAAAUGUGGUGUACGGAUACAUUUAGGCAGAGCACUCGUACAGUAAGGUGAGAAUCAGGAAAUCUGUAAUAAA
Get precursor sequence
Structure
        10          20        30        40        50         
GACACAUUUAGGCAGAA--|            A       A             UGGUGU 
                   UUCUCACCUUACU UAUGAGU UUCUGCCUAAAUG      \
                   AAGAGUGGAAUGA AUGCUCA GAGACGGAUUUAC      A
AAAUAAUGUCUAAAGGACU^            C       C             AUAGGC 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Star sequence

Mmu-Mir-1948_5p*
mirBase accessionMIMAT0017344
Sequence 
0- AUAUGAGUAUUCUGCCUAAAUG -22
Get sequence
Proposed targets TargetScanVert: mmu-miR-1948-5p
miRDB: MIMAT0017344
Mature sequence

Mmu-Mir-1948_3p
mirBase accessionMIMAT0009415
Sequence 
37- UUUAGGCAGAGCACUCGUACAG -59
Get sequence
Proposed targets microrna.org: MIMAT0009415
TargetScanVert: mmu-miR-1948-3p
miRDB: MIMAT0009415