Mir-148-P4

MirGeneDB ID

Mmu-Mir-148-P4

Family name

MIR-148 (all species)

Seed

CAGUGCA

Species

House mouse (Mus musculus)

MiRBase ID

mmu-mir-148b

Paralogues

Mmu-Mir-148-P1 Mmu-Mir-148-P3

Orthologues

Aca-Mir-148-P4 Ami-Mir-148-P4 Bta-Mir-148-P4 Cfa-Mir-148-P4 Cli-Mir-148-P4 Cmi-Mir-148-P4 Cpi-Mir-148-P4 Cpo-Mir-148-P4 Dno-Mir-148-P4 Ebu-Mir-148 Ete-Mir-148-P4 Gga-Mir-148-P4 Gja-Mir-148-P4 Hsa-Mir-148-P4 Lch-Mir-148-P4 Loc-Mir-148-P4 Mml-Mir-148-P4 Mun-Mir-148-P4 Ocu-Mir-148-P4 Pbv-Mir-148-P4 Rno-Mir-148-P4 Sha-Mir-148-P4 Spt-Mir-148-P4 Tgu-Mir-148-P4 Xla-Mir-148-P4a Xla-Mir-148-P4b Xtr-Mir-148-P4

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(mm10)

chr15: 103285148-103285206 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CCACUUACAGGCACCCUUAGCAUUUGAGGUGAAGUUCUGUUAUACACUCAGGCUGUGGCUCUGAAAGUCAGUGCAUCACAGAACUUUGUCUCGAAAGCUUUCUAGCAGCUGCCCAUUUG

Get precursor sequence

Structure

        10          20        30        40        50          
CCACUUACAGGCACCCUU--|  A       UG         U  A    CA    GUGGC 
                    AGC UUUGAGG  AAGUUCUGU AU CACU  GGCU     \
                    UCG AAGCUCU  UUCAAGACA UA GUGA  CUGA     U
GUUUACCCGUCGACGAUCUU^  A       GU         C  C    --    AAGUC 
       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

Bo	Br	Br	Ce	Em	Em	He	In	Ki	Li	Lu	Mu	Ov	Pa	Sk	Sp	Sp	Te

Star sequence

Mmu-Mir-148-P4_5p*

mirBase accession

MIMAT0017036

Sequence

0- GAAGUUCUGUUAUACACUCAGGCU -24

Get sequence

Proposed targets

TargetScanVert: mmu-miR-148b-5p
miRDB: MIMAT0017036

Mature sequence

Mmu-Mir-148-P4_3p

mirBase accession

MIMAT0000580

Sequence

37- UCAGUGCAUCACAGAACUUUGU -59

Get sequence

Proposed targets

microrna.org: MIMAT0000580
TargetScanVert: mmu-miR-148b-3p
miRDB: MIMAT0000580