| MirGeneDB ID | Mml-Mir-296 |
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| Family name |
MIR-296 (all species) |
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| Seed |
GGGCCCC |
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| Species |
Rhesus monkey (Macaca mulatta) |
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| MiRBase ID |
mml-mir-296
|
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| Paralogues |
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| Orthologues |
Bta-Mir-296
Cfa-Mir-296
Cpo-Mir-296
Dno-Mir-296
Hsa-Mir-296
Mmu-Mir-296
Rno-Mir-296
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(rheMac8_trace) |
chr10: 5590769-5590824 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUGGGAGGUGAGGAGAAAGGACCCUUCCAGAGGGCCCCCCCUCAAUCCUGUUGUGCCUAAUUCAGAGGGUUGGGUGGAGGCUCUCCUGAAGGGCUCUGAAGAGUGCUGCAGCCACA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUGGGAGGUGAGGAGAA--| GA CA C C GUUGUGC
AG CCCUUC GAGGGCC CC CUCAAUCCU C
UC GGGAAG CUCUCGG GG GGGUUGGGA U
ACACCGACGUCGUGAGAAG^ UC UC A U GACUUAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There is a second Dicer cut +1 on both arms. |
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| 3' NTU |
No
|
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| Motifs | UGUG in loop |
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Tissue expression
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| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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| Mature sequence |
Mml-Mir-296_5p |
| mirBase accession | MIMAT0006251 |
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| Sequence |
0- AGGGCCCCCCCUCAAUCCUGU -21
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-296-5p
|
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| Star sequence |
Mml-Mir-296_3p* |
| mirBase accession | MIMAT0006252 |
|---|
| Sequence |
35- AGGGUUGGGUGGAGGCUCUCC -56
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-296-3p
|
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