| MirGeneDB ID | Mdo-Mir-7392-P1a |
|---|---|
| Family name | MIR-7392 (all species) |
| Seed | ACGAGUA |
| Species | Gray short-tailed opossum (Monodelphis domestica) |
| MiRBase ID | mdo-mir-7392-1 |
| Paralogues | Mdo-Mir-7392-P1b |
| Orthologues | Sha-Mir-7392-P1 |
| Node of Origin (locus) | M. domestica |
| Node of Origin (family) | Marsupialia |
| Genome context (monDom5_add) |
|
| Precursor (pre-Mir +30nt flank) | UACGAGUAUACCUUGGUUACGUGUUAGUAAAAAUAGUAACCAUGACAUACUCGUUCCGet precursor sequence |
| Structure | 10 20 U--| ACCU G AG ACGAGUAU UGGUUAC UGUU U UGCUCAUA ACCAAUG AUAA A CCU^ CAGU - AA 50 40 30 |
| Deep sequencing | |
| Comment | There is a second Dicer cut -1 relative to what is annoated here and which corresponds to the cut in Sarcophilus. |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Mdo-Mir-7392-P1a_5p |
| mirBase accession | MIMAT0028882 |
| Sequence |
0- UACGAGUAUACCUUGGUUACGU -22
Get sequence
|
| Proposed targets |
TargetScanVert: mdo-miR-7392-5p |
| Star sequence | Mdo-Mir-7392-P1a_3p* |
| mirBase accession | MIMAT0028883 |
| Sequence |
35- GUAACCAUGACAUACUCGUUCC -57
Get sequence
|
| Proposed targets |
TargetScanVert: mdo-miR-7392-3p |
