| MirGeneDB ID | Mal-Mir-723-P1b |
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| Family name |
MIR-723 (all species) |
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| Seed |
GACAUCA |
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| Species |
Asian swamp eel (Monopterus albus) |
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| MiRBase ID |
|
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| Paralogues |
Mal-Mir-723-P1a
Mal-Mir-723-P2
|
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| Orthologues |
Gmo-Mir-723-P1
Tni-Mir-723-P1
|
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| Node of Origin (locus) |
M. albus
|
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| Node of Origin (family) |
Clupeocephala
|
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Genome context
(GCA_001952655.1_M_albus_1.0_genomic) |
KV884756.1: 497668-497727 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CGGAGUCCUAUAUCCUAUGGCAAGGAUAACGGCAGCUUUGUGUGAUGUUACUUCUGACAUAUCGAAGAAGACAUCAGAUAAAUCUGUGCUUAUCCUUGUUAGUAUUCUCAGACUCCAUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CGGAGUCCUAUAUCCUA--| CG C G UA UGACA
UGGCAAGGAUAA GCAG UUUGU UGAUGU CUUC U
AUUGUUCCUAUU UGUC AAAUA ACUACA GAAG A
AGUACCUCAGACUCUUAUG^ CG U G -- AAGCU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There is a second Drosha cut -1 on the 5p arm. |
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Mal-Mir-723-P1b_5p* |
| mirBase accession | None |
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| Sequence |
0- GGCAGCUUUGUGUGAUGUUACUUC -24
Get sequence
|
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| Mature sequence |
Mal-Mir-723-P1b_3p |
| mirBase accession | None |
|---|
| Sequence |
38- AGACAUCAGAUAAAUCUGUGCU -60
Get sequence
|
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