| MirGeneDB ID | Lpo-Mir-36-P12 |
|---|
| Family name |
MIR-36 (all species) |
|---|
| Seed |
CACCGGG |
|---|
| Species |
Atlantic horseshoe crab (Limulus polyphemus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Lpo-Mir-36-P11
Lpo-Mir-36-P13
|
|---|
| Orthologues |
Bge-Mir-36
Cbr-Mir-36-o12
Cgi-Mir-36
Cte-Mir-36
Dma-Mir-36
Dpu-Mir-36
Isc-Mir-36
Npo-Mir-36
Tca-Mir-36
|
|---|
| Node of Origin (locus) |
L. polyphemus
|
|---|
| Node of Origin (family) |
Protostomia
|
|---|
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic) |
NW_013671891.1: 17371-17431 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UCACUGGAUUACCUAAUUAGUGUACCCACCUGAUGAGCGUAGACCCGGUAAGUGUAGAUUUUCUAUCAUCACCGGGUAAACAUUCAUCCGGGUUUUGCACACAUUUAUCGACGAAAGCUAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCACUGGAUUACCUAAUUA--| CCC - C AG AAGUGUAGAU
GUGUA ACCUG AUGAG GU ACCCGGU \
CACGU UGGGC UACUU CA UGGGCCA U
CAUCGAAAGCAGCUAUUUACA^ UU- C A AA CUACUAUCUU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Lpo-Mir-36-P12_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UGAUGAGCGUAGACCCGGUAAGU -23
Get sequence
|
|---|
| Mature sequence |
Lpo-Mir-36-P12_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UCACCGGGUAAACAUUCAUCCGG -61
Get sequence
|
|---|
