MirGeneDB 2.1
MirGeneDB ID

Lpo-Mir-31-P13

Family name MIR-31 (all species)
Seed GGCAAGA
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-31-P14  Lpo-Mir-31-P15  Lpo-Mir-31-P16 
Orthologues Aae-Mir-31  Aca-Mir-31  Ami-Mir-31  Asu-Mir-31  Bfl-Mir-31  Bge-Mir-31  Bla-Mir-31  Bpl-Mir-31  Bta-Mir-31  Cbr-Mir-31  Cel-Mir-31  Cfa-Mir-31  Cgi-Mir-31  Cin-Mir-31  Cli-Mir-31  Cmi-Mir-31  Cpi-Mir-31  Cpo-Mir-31  Cte-Mir-31  Dma-Mir-31  Dno-Mir-31  Dpu-Mir-31  Dre-Mir-31  Ebu-Mir-31  Efe-Mir-31  Esc-Mir-31  Ete-Mir-31  Gga-Mir-31  Gmo-Mir-31  Hme-Mir-31  Hsa-Mir-31  Isc-Mir-31  Lch-Mir-31  Lgi-Mir-31  Mal-Mir-31  Mdo-Mir-31  Mml-Mir-31  Mmu-Mir-31  Mun-Mir-31  Npo-Mir-31  Oan-Mir-31  Obi-Mir-31  Ocu-Mir-31  Ovu-Mir-31  Pbv-Mir-31  Pfl-Mir-31  Rno-Mir-31  Sha-Mir-31  Sko-Mir-31  Spt-Mir-31  Spu-Mir-31  Sto-Mir-31  Tca-Mir-31  Tgu-Mir-31  Tni-Mir-31  Xbo-Mir-31  Xtr-Mir-31 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013665962.1: 603790-603849 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UAAAACAAAUCGCAUUCUAGAGCUAGGGUCAGGCAAGAUGUAGGCAUAGCUGCACUGUGUUAGGUUACAGCUGUUCCUCAUCAAGCCACCUCCUGGUUCUAGCAGUCAACGUUUAUGAAA
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Structure
        10          20        30        40        50          
UAAAACAAAUCGCAUUC--|          UCA   AA    U   C       CACUGUG 
                   UAGAGCUAGGG   GGC  GAUG AGG AUAGCUG       \
                   AUCUUGGUCCU   CCG  CUAC UCC UGUCGAC       U
AAAGUAUUUGCAACUGACG^          CCA   AA    -   U       AUUGGAU 
.       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Ma Ma To
Mature sequence

Lpo-Mir-31-P13_5p
mirBase accessionNone
Sequence 
0- AGGCAAGAUGUAGGCAUAGCUGC -23
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Star sequence

Lpo-Mir-31-P13_3p* (predicted)
mirBase accessionNone
Sequence 
38- AGCUGUUCCUCAUCAAGCCACC -60
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