MirGeneDB 2.1
MirGeneDB ID

Lpo-Mir-2-P4l

Family name MIR-2 (all species)
Seed AUCACAG
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-2-P1g  Lpo-Mir-2-P1h  Lpo-Mir-2-P1i  Lpo-Mir-2-P1j  Lpo-Mir-2-P1k  Lpo-Mir-2-P1l  Lpo-Mir-2-P1m  Lpo-Mir-2-P2g  Lpo-Mir-2-P2h  Lpo-Mir-2-P2j  Lpo-Mir-2-P2l  Lpo-Mir-2-P2m  Lpo-Mir-2-P3g  Lpo-Mir-2-P3h  Lpo-Mir-2-P3i  Lpo-Mir-2-P3k  Lpo-Mir-2-P3l  Lpo-Mir-2-P3m  Lpo-Mir-2-P4h  Lpo-Mir-2-P4i  Lpo-Mir-2-P4j  Lpo-Mir-2-P4k 
Orthologues Aae-Mir-2-P4-v1  Aae-Mir-2-P4-v2  Cbr-Mir-2-o4  Cel-Mir-2-o4  Dma-Mir-2-P4  Dpu-Mir-2-P4  Hme-Mir-2-P4  Isc-Mir-2-P4  Tca-Mir-2-P4-v1  Tca-Mir-2-P4-v2 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013666934.1: 100459-100519 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AGUGAGAUGAUGAACAGUCUCAUGACGCCAGUCGUCAGAGUGGCUGUGGUUCGUAAGGGUAACUUCGUAUCACAGCCAGCUUUGAUGAGUGGGGUUGUGGGCCUUACACCUUGGGUUACGU
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Structure
        10          20        30        40         50         
AGUGAGAUGAUGAACAGU--    UG  G   G         -|         U  UAAGG 
                    CUCA  AC CCA UCGUCAGAG UGGCUGUGGU CG     G
                    GGGU  UG GGU AGUAGUUUC ACCGACACUA GC     U
UGCAUUGGGUUCCACAUUCC    GU  G   G         G^         U  UUCAA 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Ma Ma To
Star sequence

Lpo-Mir-2-P4l_5p*
mirBase accessionNone
Sequence 
0- GUCGUCAGAGUGGCUGUGGUUCG -23
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Mature sequence

Lpo-Mir-2-P4l_3p
mirBase accessionNone
Sequence 
37- UAUCACAGCCAGCUUUGAUGAGUG -61
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