| MirGeneDB ID | Loc-Mir-724-v2 |
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| Family name |
MIR-724 (all species) |
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| Seed |
AAAGGGA |
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| Species |
Spotted gar (Lepisosteus oculatus) |
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| MiRBase ID |
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| Paralogues |
Loc-Mir-724-v1
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| Orthologues |
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| Node of Origin (locus) |
Neopterygii
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| Node of Origin (family) |
Neopterygii
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Genome context
(LepOcu1) |
LG3: 32539805-32539863 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAGGGCCGUGACAUCCCAGCAGACUGGAUUUAAAGGGAAUUUGCGACUGUUGGUAAAACCAUUAGGACAGCCACACCUUCCUUUUAAGAUCUUGUCUGCUGCUCUAUCGUGCCCUGUUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAGGGCCGUGACAUCCC-- U -| UU CGA GGUAAA
AGCAGAC GGAUU UAAAGGGAA UG CUGUU A
UCGUCUG UCUAG AUUUUCCUU AC GACAG C
CUUGUCCCGUGCUAUCUCG U A^ CC ACC GAUUAC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Br |
Br |
He |
He |
He |
He |
Ov |
Ov |
Ov |
Ov |
Te |
Te |
Te |
Te |
To |
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| Mature sequence |
Loc-Mir-724-v2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAAAGGGAAUUUGCGACUGUUG -22
Get sequence
|
|---|
| Star sequence |
Loc-Mir-724-v2_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- ACAGCCACACCUUCCUUUUAAGA -59
Get sequence
|
|---|
