| MirGeneDB ID | Lan-Novel-1 |
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| Family name |
LAN-NOVEL-1 (all species) |
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| Seed |
GUAAGUU |
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| Species |
Lingula (Lingula anatina) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
L. anatina
|
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| Node of Origin (family) |
L. anatina
|
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Genome context
(LinAna_1.0) |
LFEI01000037: 549096-549155 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGUUGCCUUCUACCGACUUUCUUCACAACUUGUAAGUUAACGUAGUCCAAGGUUUAGACUUUGAAACUUGCGAUUGCGAUAACUUGCGGGAUGCGUUGAAAGUGAUCGGCGAGCAAUCCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGUUGCCUUCUACCGAC-- UUCA A A -| GUUUAGA
UUUC CA CUUGUAAGUUA CGUAGUC CAAG \
AAAG GU GGGCGUUCAAU GCGUUAG GUUC C
ACCUAACGAGCGGCUAGUG UUGC A A C^ AAAGUUU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
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| Mature sequence |
Lan-Novel-1_5p |
| mirBase accession | None |
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| Sequence |
0- UGUAAGUUAACGUAGUCCAAGGUU -24
Get sequence
|
|---|
| Star sequence |
Lan-Novel-1_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- CUUGCGAUUGCGAUAACUUGCGGG -60
Get sequence
|
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