MirGeneDB 2.1
MirGeneDB ID

Isc-Mir-87-P2

Family name MIR-87 (all species)
Seed UGAGCAA
Species Deer tick (Ixodes scapularis)
MiRBase ID isc-mir-87
Paralogues Isc-Mir-87-P1 
Orthologues Aae-Mir-87-P2  Bge-Mir-87-P2a  Bge-Mir-87-P2b  Cbr-Mir-87-o2  Cel-Mir-87-o2  Cgi-Mir-87-P2  Csc-Mir-87-P2k  Csc-Mir-87-P2l  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dan-Mir-87-P2-v2  Dme-Mir-87-P2-v1  Dme-Mir-87-P2-v2  Dmo-Mir-87-P2-v1  Dmo-Mir-87-P2-v2  Dsi-Mir-87-P2-v1  Dsi-Mir-87-P2-v2  Dya-Mir-87-P2-v1  Dya-Mir-87-P2-v2  Hme-Mir-87-P2  Lan-Mir-87-P2  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j  Tca-Mir-87-P2 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(IscaWI)		 DS929532: 41490-41548 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CGGUGGGCACACAUCUCGCUUCUUGACUGCCUGCCUGAAAAUUUGUCUCAAACCUUUCAUAGUGUAGGUGAGCAAAGUUUCAGGUGUGUUGUCUUGGAGGACACACUGCAUCUCUGCAA
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Structure
        10          20        30        40        50        60
CGGUGGGCACACAUCUCG--|   UU   U  C         A    U   AA    UUCA 
                    CUUC  GAC GC UGCCUGAAA UUUG CUC  ACCU    U
                    GAGG  CUG UG GUGGACUUU AAAC GAG  UGGA    A
AACGUCUCUACGUCACACAG^   UU   U  U         G    -   --    UGUG 
       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Al Mi Mi Mi Sa Sa Sa Sa To
Star sequence

Isc-Mir-87-P2_5p*
mirBase accessionNone
Sequence 
0- CUGCCUGAAAAUUUGUCUCAAACCU -25
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Mature sequence

Isc-Mir-87-P2_3p
mirBase accessionMIMAT0012707
Sequence 
37- GUGAGCAAAGUUUCAGGUGUGU -59
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