| MirGeneDB ID | Hme-Novel-3 |
|---|
| Family name |
HME-NOVEL-3 (all species) |
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| Seed |
GCGGAGA |
|---|
| Species |
Longwing butterfly (Heliconius melpomene) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
H. melpomene
|
|---|
| Node of Origin (family) |
H. melpomene
|
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Genome context
(Hmel_1) |
HE671335: 621504-621559 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUCUAAAAAGAAGGUAUUGAAAAUGUAUGAAAUUGCUCGGUUUCUCCGCUUUAGUCAUAACUACAGCGGAGAAACUGAGCAAUUCCACAAGCCCGAAUUCACUUCAUGCACCUUGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUCUAAAAAGAAGGUAUUGAAAAUGUA--| A UUAGUC
UG AAUUGCUCGGUUUCUCCGCU A
AC UUAACGAGUCAAAGAGGCGA U
CGUUCCACGUACUUCACUUAAGCCCGAAC^ C CAUCAA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Star sequence |
Hme-Novel-3_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AAUUGCUCGGUUUCUCCGCUUU -22
Get sequence
|
|---|
| Mature sequence |
Hme-Novel-3_3p |
| mirBase accession | None |
|---|
| Sequence |
34- AGCGGAGAAACUGAGCAAUUCC -56
Get sequence
|
|---|
