| MirGeneDB ID | Hme-Novel-2 |
|---|
| Family name |
HME-NOVEL-2 (all species) |
|---|
| Seed |
CCAAUAA |
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| Species |
Longwing butterfly (Heliconius melpomene) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
H. melpomene
|
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| Node of Origin (family) |
H. melpomene
|
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Genome context
(Hmel_1) |
HE671335: 621364-621419 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCCUUUAUAUAGCAUCGCCUUUAUAUAGCUUCGCUGUUCCCGUUAUUUGCGUUGGUAUUUUCAAUCCAAUAAUGGGAAAGGUGAAGCUAAUGGGCUUCUGCAAGUCGGCCACAAGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GCCUUUAUAUAGCAUCG-----| UUAUA G U C GGUA
CCU UAGCUUCGCU UUCCCGUUAUU G GUU \
GGG AUCGAAGUGG AAGGGUAAUAA C UAA U
CGAACACCGGCUGAACGUCUUC^ UA--- A - C CUUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Hme-Novel-2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UCGCUGUUCCCGUUAUUUGCGUU -23
Get sequence
|
|---|
| Mature sequence |
Hme-Novel-2_3p |
| mirBase accession | None |
|---|
| Sequence |
34- UCCAAUAAUGGGAAAGGUGAAG -56
Get sequence
|
|---|
