| MirGeneDB ID | Hme-Mir-989-P1 |
|---|
| Family name |
MIR-989 (all species) |
|---|
| Seed |
GUGAUGU |
|---|
| Species |
Longwing butterfly (Heliconius melpomene) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Hme-Mir-989-P2
|
|---|
| Orthologues |
Aae-Mir-989
Dan-Mir-989
Dme-Mir-989
Dmo-Mir-989
Dsi-Mir-989
Dya-Mir-989
Tca-Mir-989
|
|---|
| Node of Origin (locus) |
H. melpomene
|
|---|
| Node of Origin (family) |
Endopterygota
|
|---|
Genome context
(Hmel_1) |
FARY01123984.1: 1726-1785 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCAUUACCUCACAGUCACGUGGUCUCUGCGGUACAACGUGUGAUGUGACGUAGUGGAAGUCUCGACCUGGAUAUACAACAUUAGCUUAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGG-- C GU-| GGUCUCU
CCAUUAC UCACA CACGU \
GGUGAUG AGUGU GUGCA G
GAUUCGAUUACAACAUAUAGGUCCAGCUCUGAA C AGU^ ACAUGGC
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | Not in assembly but in trace archive. |
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Hme-Mir-989-P1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GCCAUUACCUCACAGUCACGUG -22
Get sequence
|
|---|
| Mature sequence |
Hme-Mir-989-P1_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UGUGAUGUGACGUAGUGGAAG -60
Get sequence
|
|---|
