MirGeneDB 2.1
MirGeneDB ID

Hme-Mir-3-P15

Family name MIR-3 (all species)
Seed CACUGGG
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID
Paralogues Hme-Mir-3-P14  Hme-Mir-3-P16  Hme-Mir-3-P17  Hme-Mir-3-P18  Hme-Mir-3-P19  Hme-Mir-3-P20  Hme-Mir-3-P21  Hme-Mir-3-P22  Hme-Mir-3-P23  Hme-Mir-3-P24  Hme-Mir-3-P25  Hme-Mir-3-P26  Hme-Mir-3-P27 
Orthologues Dma-Mir-3  Dpu-Mir-3 
Node of Origin (locus) H. melpomene
Node of Origin (family) Pancrustacea
Genome context
(Hmel_1)		 HE671859: 113451-113508 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UAUAGUGAGUGAAAAUGAUCUACUUAAAGUAGUUUUCACUAAUACAGUUGGCAUGUCAUGUAUCUGUCACUGGGUUAGUGAUUACUGCUUUGGAAGAUUACUUCGACUAUUAUUAUUA
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Structure
        10           20        30        40        50         
UAUAGUGAGUGAAAAUG---|   A  U        UU       UA    U    UGUCA 
                    AUCU CU AAAGUAGU  UCACUAA  CAGU GGCA     \
                    UAGA GG UUUCGUCA  AGUGAUU  GUCA CUGU     U
AUUAUUAUUAUCAGCUUCAU^   A  -        UU       GG    -    CUAUG 
      110       100         90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ad Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-3-P15_5p*
mirBase accessionNone
Sequence 
0- AGUUUUCACUAAUACAGUUGGCA -23
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Mature sequence

Hme-Mir-3-P15_3p
mirBase accessionNone
Sequence 
36- UCACUGGGUUAGUGAUUACUGC -58
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