| MirGeneDB ID | Ete-Novel-3 |
|---|
| Family name |
ETE-NOVEL-3 (all species) |
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| Seed |
CUCGGAA |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
E. telfairi
|
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| Node of Origin (family) |
E. telfairi
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Genome context
(echTel2) |
JH980399: 703052-703110 [+]
UCSC
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Precursor
(pre-Mir +30nt flank) |
AAAGCCAGCUUUGACUGCUCAGACUGGGGUUCUCGGAAUGGAAGCGCUUUACCUUAAUCUGAGCUGGAAAGUGCUGACAUUUCGAGGAUCCCCUUUUGAGGCAAGCUUCUGGAUCCUAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAAGCCAGCUUUGACUG--| CU GA A UUAAU
CUCAGA GGGGUUCUCGGAAUG AGCGCUUU CC C
GAGUUU CCCUAGGAGCUUUAC UCGUGAAA GG U
UAUCCUAGGUCUUCGAACG^ UC AG - UCGAG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
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| Mature sequence |
Ete-Novel-3_5p |
| mirBase accession | None |
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| Sequence |
0- UCUCGGAAUGGAAGCGCUUUACC -23
Get sequence
|
|---|
| Star sequence |
Ete-Novel-3_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- AAAGUGCUGACAUUUCGAGGAU -59
Get sequence
|
|---|
