| MirGeneDB ID | Ete-Mir-671 |
| Family name |
MIR-671 (all species) |
| Seed |
GGAAGCC |
| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
| MiRBase ID |
|
| Paralogues |
|
| Orthologues |
Bta-Mir-671
Cfa-Mir-671
Cpo-Mir-671
Dno-Mir-671
Hsa-Mir-671
Mml-Mir-671
Mmu-Mir-671
Ocu-Mir-671
Rno-Mir-671
Sha-Mir-671
|
| Node of Origin (locus) |
Theria
|
| Node of Origin (family) |
Theria
|
Genome context (echTel2) |
JH980304: 19643906-19643965 [+]
UCSC
|
Precursor (pre-Mir +30nt flank) |
UGGCUGGGGAACUGGCAGGCCAGGAAGAGGAGGAAGCCCUGGAGGGGCUGGAGGUGAUGGAUGUUUUCCUCCGGUUCUCAGGGCUCCACCUCUUUCGGGCCGUAGAGCCAGGGCUGGUGC
Get precursor sequence
|
| Structure | 10 20 30 40 50 60
UGGCUGGGGAACUGGCA--| A A A GA UGAUGG
GGCC GGAAGAGG GGA GCCCUG GGGGCUGGAGG \
CCGG CUUUCUCC CCU CGGGAC UCUUGGCCUCC A
CGUGGUCGGGACCGAGAUG^ G A - -- UUUUGU
. 110 100 90 80 70 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
Unknown
|
| Motifs | No |
Tissue expression
|
|
| Mature sequence |
Ete-Mir-671_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AGGAAGCCCUGGAGGGGCUGGAGG -24
Get sequence
|
| Co-mature sequence |
Ete-Mir-671_3p (predicted) |
| mirBase accession | None |
| Sequence |
39- UCCGGUUCUCAGGGCUCCACC -60
Get sequence
|