| MirGeneDB ID | Ete-Mir-505-v2 |
| Family name |
MIR-505 (all species) |
| Seed |
GGAGCCA |
| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
| MiRBase ID |
|
| Paralogues |
Ete-Mir-505-v1
|
| Orthologues |
Bta-Mir-505-v2
Cfa-Mir-505-v2
Cpo-Mir-505-v2
Dno-Mir-505-v2
Hsa-Mir-505-v2
Mml-Mir-505-v2
Mmu-Mir-505-v2
Ocu-Mir-505-v2
Rno-Mir-505-v2
|
| Node of Origin (locus) |
Eutheria
|
| Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980367: 5183544-5183602 [+]
UCSC
|
Precursor (pre-Mir +30nt flank) |
CUGCCGGUAGGACAUUGAUGCGCCCAGUGGGGGAGCCAGGAAGUAUUGAUGUUUCCGCCAGUUUAGCAUCAACAUUUGCUGCUUUCCUCUCUGGAGCAUCGCCAAGUGCAUGGAUUUUC
Get precursor sequence
|
| Structure | 10 20 30 40 50
CUGCCGGUAGGACAUUG---| GC U C G A UUCCGC
AUGC CCAG GGGGGAG CAG AAGU UUGAUGU \
UACG GGUC CUCCUUU GUC UUUA AACUACG C
CUUUUAGGUACGUGAACCGC^ A- U C G C AUUUGA
110 100 90 80 70 60 |
| Deep sequencing |
|
| 3' NTU |
Unknown
|
| Motifs | No |
Tissue expression
|
|
| Mature sequence |
Ete-Mir-505-v2_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- GGGAGCCAGGAAGUAUUGAUGU -22
Get sequence
|
| Co-mature sequence |
Ete-Mir-505-v2_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- AUCAACAUUUGCUGCUUUCCUC -59
Get sequence
|