| MirGeneDB ID | Ete-Mir-448 |
|---|
| Family name |
MIR-448 (all species) |
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| Seed |
UGCAUAU |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bta-Mir-448
Cfa-Mir-448
Cpo-Mir-448
Hsa-Mir-448
Mml-Mir-448
Mmu-Mir-448
Ocu-Mir-448
Rno-Mir-448
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(echTel2) |
JH980336: 12020066-12020146 [+]
UCSC
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Precursor
(pre-Mir +30nt flank) |
AGCAGUUGACCUUCACAUGGGUGGGGAGGUUGAACAUCCUGCAUAGUGCUGCCAGGAAACCCCUAUUUCAUAAUAAGAGGGGGCAGGCUGGUUGCAUAUGUAGGAUGUCCCAUCUCCCCACCCACUUCGCCACGACAGAUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60 70
AGCAGUUGACCUUCACAU| UGA G U AGGAAACCCCUAUUUCA
GGGUGGGGAGGU ACAUCCUGCAUA UGC GCC U
CCCACCCCUCUA UGUAGGAUGUAU ACG UGG A
CUAGACAGCACCGCUUCA^ CCC - U UCGGACGGGGGAGAAUA
. 130 120 110 100 90 80 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Ete-Mir-448_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UGAACAUCCUGCAUAGUGCUGCC -23
Get sequence
|
|---|
| Mature sequence |
Ete-Mir-448_3p |
| mirBase accession | None |
|---|
| Sequence |
61- UUGCAUAUGUAGGAUGUCCC -81
Get sequence
|
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