| MirGeneDB ID | Ete-Mir-431 |
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| Family name |
MIR-431 (all species) |
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| Seed |
GUCUUGC |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-431
Cfa-Mir-431
Cpo-Mir-431
Hsa-Mir-431
Mml-Mir-431
Mmu-Mir-431
Ocu-Mir-431
Rno-Mir-431
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(echTel2) |
JH980297: 82400847-82400910 [-]
UCSC
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Precursor
(pre-Mir +30nt flank) |
GCACUGCUCUCUCUUGGUCGUCCUGCGGGCUGUCUUGCAGGCCGUCAUGCAGGCCACCUUGACGGUAACGUUGCAGGUCGCCCUGCCGGGCUUCUCGCAAGACGACAUCCUCGUCGUUCACAAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GCACUGCUCUCUCUUGG--| C CU U C UCA GGCCACCUU
UCGUC UGCGGG GUCU GCAGG CG UGCA G
AGCAG ACGCUC CGGG CGUCC GC ACGU A
UAACACUUGCUGCUCCUAC^ A UU C C UGG UGCAAUGGC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There is a second Dicer cut +3 on the 3p arm. |
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
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| Mature sequence |
Ete-Mir-431_5p |
| mirBase accession | None |
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| Sequence |
0- UGUCUUGCAGGCCGUCAUGCA -21
Get sequence
|
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| Co-mature sequence |
Ete-Mir-431_3p |
| mirBase accession | None |
|---|
| Sequence |
43- CAGGUCGCCCUGCCGGGCUUC -64
Get sequence
|
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