| MirGeneDB ID | Ete-Mir-3613 |
|---|
| Family name |
MIR-3613 (all species) |
|---|
| Seed |
GUUGUAC |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
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| Orthologues |
Bta-Mir-3613
Cfa-Mir-3613
Cpo-Mir-3613
Dno-Mir-3613
Hsa-Mir-3613
Mdo-Mir-3613
Mml-Mir-3613
Ocu-Mir-3613
Sha-Mir-3613
|
|---|
| Node of Origin (locus) |
Theria
|
|---|
| Node of Origin (family) |
Theria
|
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Genome context
(echTel2) |
JH980311: 7380992-7381049 [+]
UCSC
|
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Precursor
(pre-Mir +30nt flank) |
CAGGACGCGCAAUAGCAGUUGGGUUUGGAUUGUUGUACUUUUUUUUUUGUUCGUUUAAUUUGGAGGAACAAAAAAAAAGCCCAACCCUUCACACCACUUCAUCUGCAUCUCUCGGACC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAGGACGCGCAAUAGCAGUUG--| U UU UA U GUUUAA
GGU UGGA GUUG CUUUUUUUUU GUUC \
CCA ACUU CAAC GAAAAAAAAA CAAG U
CCAGGCUCUCUACGUCUACUUCA^ C CC CC - GAGGUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Ete-Mir-3613_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGUUGUACUUUUUUUUUUGUUC -22
Get sequence
|
|---|
| Star sequence |
Ete-Mir-3613_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- ACAAAAAAAAAGCCCAACCCU -58
Get sequence
|
|---|
