| MirGeneDB ID | Ete-Mir-361-v1 |
|---|
| Family name |
MIR-361 (all species) |
|---|
| Seed |
UAUCAGA |
|---|
| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Ete-Mir-361-v2
|
|---|
| Orthologues |
Bta-Mir-361-v1
Cfa-Mir-361-v1
Cpo-Mir-361-v1
Dno-Mir-361-v1
Hsa-Mir-361-v1
Mml-Mir-361-v1
Mmu-Mir-361-v1
Ocu-Mir-361-v1
Rno-Mir-361-v1
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(echTel2) |
JH980378: 4175603-4175666 [-]
UCSC
|
|---|
Precursor
(pre-Mir +30nt flank) |
AAUAGUGAUUCUUUCCUGGGAUUUGGGAGCUUAUCAGAAUCUCCAGGGGUACUUAUAAUUUGAAAAAAGUCCCCCAGGUGUGAUUCUGAUUUGCUUCCUUCUCCCCCUCCUCCUUUGAGAAUCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAUAGUGAUUCUUUCCU-- UUU UU U--| A U UUAUAAU
GGGA GGGAGC AUCAGAAUC CC GGGG AC U
CCCU CCUUCG UAGUCUUAG GG CCCC UG U
ACUAAGAGUUUCCUCCUCC CUU UU UGU^ A C AAAAAAG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Ete-Mir-361-v1_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUAUCAGAAUCUCCAGGGGUAC -22
Get sequence
|
|---|
| Star sequence |
Ete-Mir-361-v1_3p* |
| mirBase accession | None |
|---|
| Sequence |
40- CCCCCAGGUGUGAUUCUGAUUUGC -64
Get sequence
|
|---|
