| MirGeneDB ID | Ete-Mir-136-v2 |
| Family name |
MIR-136 (all species) |
| Seed |
UCAUCGU |
| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
| MiRBase ID |
|
| Paralogues |
Ete-Mir-136-v1
|
| Orthologues |
Bta-Mir-136-v2
Cfa-Mir-136-v2
Cpo-Mir-136-v2
Dno-Mir-136-v2
Hsa-Mir-136-v2
Mml-Mir-136-v2
Mmu-Mir-136-v2
Ocu-Mir-136-v2
Rno-Mir-136-v2
|
| Node of Origin (locus) |
Eutheria
|
| Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980297: 82397135-82397190 [-]
UCSC
|
Precursor (pre-Mir +30nt flank) |
CCGCGGCGGUAUUGGAUGAGCCCUCGGAGGACUCCAUUUGUUUUGAUGAUGGAUUCUUAUGCUCCAUCAUCGUCUCAAAUGAGUCUUCAGAGGGUUCUAUCAUUUCUUCGGUUGGA
Get precursor sequence
|
| Structure | 10 20 30 40 50
CCGCGGCGGUAUUGGAU--| G C UUU AUUCU
GAGCCCUC GAGGACUC AUUUG UGAUGAUGG \
CUUGGGAG CUUCUGAG UAAAC GCUACUACC U
AGGUUGGCUUCUUUACUAU^ A - UCU UCGUA
110 100 90 80 70 60 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | UG at 5p(-14) |
Tissue expression
|
|
| Star sequence |
Ete-Mir-136-v2_5p* |
| mirBase accession | None |
| Sequence |
0- ACUCCAUUUGUUUUGAUGAUGG -22
Get sequence
|
| Mature sequence |
Ete-Mir-136-v2_3p |
| mirBase accession | None |
| Sequence |
35- AUCAUCGUCUCAAAUGAGUCU -56
Get sequence
|