| MirGeneDB ID | Esc-Novel-67 |
|---|
| Family name |
ESC-NOVEL-67 (all species) |
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| Seed |
GAAGUAA |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
E. scolopes
|
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| Node of Origin (family) |
E. scolopes
|
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-67_pre_SRIE01037308.1:2053586-2053842: 101-157 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAUAAGAAAAGUGAGAGUUAUGAAACUGCCAGAAGUAAACUUAAGGGUCACUUUAUAUUCUGUUGUGACUCUUCUGUAUGCUGCAGGUGGUCCAACAGAUGCAGGGAAGGAAGGAUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAUAAGAAAAGUGAGAGUUAUGAA--| UG AGA A UU UUUAUA
AC CC AGUA AC AAGGGUCAC \
UG GG UCGU UG UUCUCAGUG U
CUAGGAAGGAAGGGACGUAGACAACC^ GU ACG A UC UUGUCU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Esc-Novel-67_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AGAAGUAAACUUAAGGGUCACU -22
Get sequence
|
|---|
| Star sequence |
Esc-Novel-67_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- UGACUCUUCUGUAUGCUGCAGG -57
Get sequence
|
|---|
