| MirGeneDB ID | Esc-Novel-66 |
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| Family name |
ESC-NOVEL-66 (all species) |
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| Seed |
AAAUGCG |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
E. scolopes
|
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| Node of Origin (family) |
E. scolopes
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-66_pre_SRIE01033836.1:677295-677556: 101-162 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGAGGUAAUUGGAAAAGCCGGUGUAAGGGAAGCGGAUCUUGGCGCGUUUUUUCAUAAUAAUUCGAAAGUGAAAAUGCGUCAAGAUUUGCUGCUCUUGCAUAGUUCAUUCAACUCACCCAUCG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GGAGGUAAUUGGAAAAGCCG--| A UCAUAAUA
GUGUAAGGG AGCGGAUCUUGGCGCGUUUUU A
UACGUUCUC UCGUUUAGAACUGCGUAAAAG U
GCUACCCACUCAACUUACUUGA^ G UGAAAGCU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Esc-Novel-66_5p* |
| mirBase accession | None |
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| Sequence |
0- AGCGGAUCUUGGCGCGUUUUUU -22
Get sequence
|
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| Mature sequence |
Esc-Novel-66_3p |
| mirBase accession | None |
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| Sequence |
40- AAAAUGCGUCAAGAUUUGCUGC -62
Get sequence
|
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