| MirGeneDB ID | Esc-Novel-62 |
|---|
| Family name |
ESC-NOVEL-62 (all species) |
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| Seed |
UGAGCCC |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
E. scolopes
|
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| Node of Origin (family) |
E. scolopes
|
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-62_pre_SRIE01052252.1:1810435-1810694: 101-160 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCUUCACACUGGAAUCGAAUGCUCCCUUUGCGCGACUCCGACGGGUCCCCUACUUAAAGUUCGACGUAGUGAGCCCGUUGGAGUCGGGCUCGGUGAGUCUUCCACGCUUCGACCAUUCUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCUUCACACUGGAAUCGAAU-- -| UUU G CCC CUUAAA
GCUC CC GC CGACUCCGACGGGU CUA G
UGAG GG CG GCUGAGGUUGCCCG GAU U
AUCUUACCAGCUUCGCACCUUC U^ CU- G AGU GCAGCU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Esc-Novel-62_5p* |
| mirBase accession | None |
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| Sequence |
0- CGCGACUCCGACGGGUCCCCUA -22
Get sequence
|
|---|
| Mature sequence |
Esc-Novel-62_3p |
| mirBase accession | None |
|---|
| Sequence |
38- GUGAGCCCGUUGGAGUCGGGCU -60
Get sequence
|
|---|
