| MirGeneDB ID | Esc-Novel-6 |
|---|
| Family name |
CEP-NOVEL-6 (all species) |
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| Seed |
GAACCAU |
|---|
| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
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| Orthologues |
Npo-Novel-6
Obi-Novel-6
Ovu-Novel-6
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|---|
| Node of Origin (locus) |
Cephalopoda
|
|---|
| Node of Origin (family) |
Cephalopoda
|
|---|
Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-6_pre_SRIE01001855.1:532689-532829: 41-101 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAUUGAAAACUGGAAUCAGAGAUCAUGUGGUGAACCAUGGUUAAUGAACAUUGGUCCGUUCAAAGUGCAAUGGUCUUGACCAUGAUUUACCUUAUGAGGUUUAUUGAUCUGGACAAAAAGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GAUUGAAAACUGGAAUC--| GA U C U A GUCCGU
AGA UCAUG GGUGAA CAUGGUUAA GA CAUUG U
UUU AGUAU CCAUUU GUACCAGUU CU GUAAC C
AGAAAAACAGGUCUAGUUA^ GG U A - G GUGAAA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Esc-Novel-6_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGAACCAUGGUUAAUGAACAUUG -23
Get sequence
|
|---|
| Star sequence |
Esc-Novel-6_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- AUGGUCUUGACCAUGAUUUACC -61
Get sequence
|
|---|
