| MirGeneDB ID | Esc-Novel-58 |
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| Family name |
ESC-NOVEL-58 (all species) |
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| Seed |
AGUCUGC |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
E. scolopes
|
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| Node of Origin (family) |
E. scolopes
|
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-58_pre_SRIE01026880.1:5349573-5349715: 43-101 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAUCAUAGAUGCAAAAUCGUUCGGCAUUUAUAGUCUGCAAUCGACUUUAGGUAUUCUUUUACCGAAUCUGAAGACGGAAGCAGACUUAGAAUUCCGUAACUUUGACACAAACAAGCAAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAUCAUAGAUGCAAAAUC- -| C AU AA A AUUCUU
GUU CGG AUUU AGUCUGC UCG CUUUAGGU \
CAA GCC UAAG UCAGACG GGC GAAGUCUA U
GAACGAACAAACACAGUUU U^ U AU AA A AGCCAU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
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| Mature sequence |
Esc-Novel-58_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAGUCUGCAAUCGACUUUAGGU -22
Get sequence
|
|---|
| Star sequence |
Esc-Novel-58_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- CUGAAGACGGAAGCAGACUUAG -59
Get sequence
|
|---|
