| MirGeneDB ID | Esc-Novel-33 |
|---|---|
| Family name | COL-NOVEL-33 (all species) |
| Seed | GAAGAGA |
| Species | Hawaiian bobtail squid (Euprymna scolopes) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Obi-Novel-33 Ovu-Novel-33 |
| Node of Origin (locus) | Coleoidea |
| Node of Origin (family) | Coleoidea |
| Genome context (GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-33_pre_SRIE01018305.1:291289-291418: 30-101 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | UGAAGAGACCGUGCAGGUCUGUGUGCUAGAAUGUUAACAACAACACUCACAGACACGCGCUGUCUACUCACUGet precursor sequence |
| Structure | 10 20 30 --| AG C AG UGCUAGAA U UGA AGAC GUGC GUCUGUG UG U ACU UCUG CGCG CAGACAC AC A UC^ CA U CA UCACAACA A 70 60 50 40 |
| Deep sequencing | |
| Comment | There is a second Dicer cut -1 on the 3p arm. |
| 3' NTU | No |
| Motifs | UGUG in loop |
| Mature sequence | Esc-Novel-33_5p |
| mirBase accession | None |
| Sequence |
0- UGAAGAGACCGUGCAGGUCUGU -22
Get sequence
|
| Star sequence | Esc-Novel-33_3p* |
| mirBase accession | None |
| Sequence |
50- AGACACGCGCUGUCUACUCACU -72
Get sequence
|
