| MirGeneDB ID | Esc-Novel-26 |
|---|
| Family name |
COL-NOVEL-26 (all species) |
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| Seed |
GUGGCAU |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Obi-Novel-26
Ovu-Novel-26
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| Node of Origin (locus) |
Coleoidea
|
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| Node of Origin (family) |
Coleoidea
|
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-26_pre_SRIE01041135.1:2164905-2165164: 101-160 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGGGCGAGGCCACUACAGUUGGUCUAAUUCAGUGGCAUGUGAUGUUCUCUACGUAUCCAUAGUAACGACGAGAACAGUGGAUGUCAUUGAACGAAAUCAACAUGUCACACUUAGAAGAGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGGGCGAGGCCACUACA--| CUAA G GA UACGUAUCC
GUUGGU UUCAGUGGCAU U UGUUCUC A
CAACUA AAGUUACUGUA G ACAAGAG U
UGAGAAGAUUCACACUGUA^ AAGC G UG CAGCAAUGA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Esc-Novel-26_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AGUGGCAUGUGAUGUUCUCUAC -22
Get sequence
|
|---|
| Co-mature sequence |
Esc-Novel-26_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
38- CGAGAACAGUGGAUGUCAUUGA -60
Get sequence
|
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