| MirGeneDB ID | Ebu-Mir-92-P1e |
|---|
| Family name |
MIR-92 (all species) |
|---|
| Seed |
AUUGCAC |
|---|
| Species |
Inshore hagfish (Eptatretus burgeri) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Ebu-Mir-92-P2e
Ebu-Mir-92-P2f
|
|---|
| Orthologues |
Asu-Mir-92
Bfl-Mir-92-o1
Bla-Mir-92-o1
Cel-Mir-92
Esc-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
|
|---|
| Node of Origin (locus) |
E. burgeri
|
|---|
| Node of Origin (family) |
Bilateria
|
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Genome context
(Eburgeri_3) |
FYBX02010694.1: 1553862-1553920 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GGGGUUCUUGGUUGAUGUCCCGCCCUGCUAAGGCCUGGAUUGGCUGCAAUGCAUGUGUGUUCAUUUGUAUUGCACUUGUCCCGGCCUCUGUGGGGGUGUUGGGAACUUUCCCACAUCCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGGGUUCUUGGUUGAUGUCCCG--| UG UA U U C UGUGU
CCC C AGGCC GGAU GG UGCAAUGCA G
GGG G UCCGG CCUG UC ACGUUAUGU U
CCCUACACCCUUUCAAGGGUUGUG^ GU UC C U - UUACU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UGUG in loop |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Ebu-Mir-92-P1e_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- AGGCCUGGAUUGGCUGCAAUGCA -23
Get sequence
|
|---|
| Mature sequence |
Ebu-Mir-92-P1e_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UAUUGCACUUGUCCCGGCCUCU -59
Get sequence
|
|---|
