MirGeneDB 2.1
MirGeneDB ID

Ebu-Mir-29-P1f

Family name MIR-29 (all species)
Seed AGCACCA
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-29-P1e  Ebu-Mir-29-P2e  Ebu-Mir-29-P2f 
Orthologues Aae-Mir-29-P1  Asu-Mir-29-P1  Bfl-Mir-29-P1  Bla-Mir-29-P1  Cbr-Mir-29-P1  Cel-Mir-29-P1  Cgi-Mir-29-P1  Cte-Mir-29-P1  Dan-Mir-29-P1  Dme-Mir-29-P1  Dmo-Mir-29-P1  Dsi-Mir-29-P1  Dya-Mir-29-P1  Esc-Mir-29-P1  Hme-Mir-29-P1  Npo-Mir-29-P1  Obi-Mir-29-P1  Ovu-Mir-29-P1  Pfl-Mir-29-P1  Pmi-Mir-29-P1  Sko-Mir-29-P1  Spu-Mir-29-P1  Tca-Mir-29-P1  Xbo-Mir-29-P1 
Node of Origin (locus) E. burgeri
Node of Origin (family) Bilateria
Genome context
(Eburgeri_3)		 FYBX02010484.1: 381441-381502 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGCAUGCAGAGCCUGGCUGCGGUACGAGUCUGGUUUCACAUGGUGCCAUAGAUGAAUUCUGGCUGAGUCUAGCACCAUUUGAAAUCAGUGUUCCUACCGUCAGCAGAGCUACAAAAUCAGG
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Structure
        10         20         30         40        50        60 
CCGCAUGCAGAGCCUGG-   -     C  GU-|        C       CA    UGAAUUC 
                  CUG CGGUA GA   CUGGUUUCA AUGGUGC  UAGA       \
                  GAC GCCAU CU   GACUAAAGU UACCACG  AUCU       U
GGACUAAAACAUCGAGAC   U     C  UGU^        U       --    GAGUCGG 
120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ebu-Mir-29-P1f_5p*
mirBase accessionNone
Sequence 
0- CUGGUUUCACAUGGUGCCAUAGA -23
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Mature sequence

Ebu-Mir-29-P1f_3p
mirBase accessionNone
Sequence 
40- UAGCACCAUUUGAAAUCAGUGU -62
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