MirGeneDB 2.1
MirGeneDB ID

Ebu-Mir-142-v1

Family name MIR-142 (all species)
Seed AUAAAGU
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-142-v2  Ebu-Mir-142-v3  Ebu-Mir-142-v4 
Orthologues Pma-Mir-142-v1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02010728.1: 1342342-1342400 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGUCAUUGCUGGUGGACAGUGCAGUUAUCCAUAAAGUAGAAAGCACUACUAGGCCUCUCUCCAAGUGUAGUGUUUCCUACUUUAUGGAUAAGUGUACUGUGAUCUACAGACCCGACAA
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Structure
        10          20        30        40        50         
CAGUCAUUGCUGGUGGA--|      G               A         UAGGCCUC 
                   CAGUGCA UUAUCCAUAAAGUAG AAGCACUAC        \
                   GUCAUGU AAUAGGUAUUUCAUC UUUGUGAUG        U
AACAGCCCAGACAUCUAGU^      G               C         UGAACCUC 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ebu-Mir-142-v1_5p
mirBase accessionNone
Sequence 
0- CAUAAAGUAGAAAGCACUACU -21
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Star sequence

Ebu-Mir-142-v1_3p*
mirBase accessionNone
Sequence 
38- UAGUGUUUCCUACUUUAUGGA -59
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