| MirGeneDB ID | Dya-Mir-955 |
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| Family name |
MIR-955 (all species) |
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| Seed |
AUCGUGC |
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| Species |
Fruit fly (Drosophila yakuba) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Dan-Mir-955
Dme-Mir-955
Dmo-Mir-955
Dsi-Mir-955
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| Node of Origin (locus) |
Drosophila
|
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| Node of Origin (family) |
Drosophila
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Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel) |
3L: 3844770-3844832 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAAUAAGUAAAGUAAACAGCUAAUCAACUCCAUCGUGCAGAAGUUUGAGUGUCCUGUGUGUUGCCUAAUCGCAUUCAAUUUCUGAACGGUAGAGAUGGUACGCUUAGAAACAACCUAAAAUGA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AAAUAAGUAAAGUAAAC--| UA A C G U CCUGUGUG
AGC AUCA CUC AUCGU CAGAAGUU GAGUGU U
UCG UGGU GAG UGGCA GUCUUUAA CUUACG U
AGUAAAAUCCAACAAAGAU^ CA A A A - CUAAUCCG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Dya-Mir-955_5p |
| mirBase accession | None |
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| Sequence |
0- CAUCGUGCAGAAGUUUGAGUGUC -23
Get sequence
|
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| Star sequence |
Dya-Mir-955_3p* |
| mirBase accession | None |
|---|
| Sequence |
41- CAUUCAAUUUCUGAACGGUAGA -63
Get sequence
|
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