| MirGeneDB ID | Dno-Mir-1271 |
|---|
| Family name |
MIR-1271 (all species) |
|---|
| Seed |
UUGGCAC |
|---|
| Species |
Nine-banded armadillo (Dasypus novemcinctus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-1271
Cfa-Mir-1271
Cpo-Mir-1271
Ete-Mir-1271
Hsa-Mir-1271
Mml-Mir-1271
Mmu-Mir-1271
Rno-Mir-1271
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(dasNov3) |
JH562710: 929911-929968 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AGCCCUGUACCUGCAGCACCCAGAUGAGUGCUUGGCACCUAGUAAGCACACAGUAAACUCUUGUUGGGUGCCUGCUGUGUGCCAGGCAUGGAGCUGGGGCUUUUGGGGGUCCAAAGGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGCCCUGUACCUGCAGCA--| AUGA C A A GUAAA
CCCAG GUGCUUGGCAC UAGUA GCAC CA C
GGGUC UACGGACCGUG GUCGU CGUG GU U
UGGAAACCUGGGGGUUUUCG^ GAGG U C G UGUUC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Dno-Mir-1271_5p |
| mirBase accession | None |
|---|
| Sequence |
0- CUUGGCACCUAGUAAGCACACA -22
Get sequence
|
|---|
| Star sequence |
Dno-Mir-1271_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
36- GGUGCCUGCUGUGUGCCAGGCA -58
Get sequence
|
|---|
